J. Biol. Chem., Vol. 261, Issue 23, 10610-10617, 08, 1986
Glutamyl-tRNA synthetase of Escherichia coli. Isolation and primary structure of the gltX gene and homology with other aminoacyl-tRNA synthetases
R Breton, H Sanfacon, I Papayannopoulos, K Biemann and J Lapointe
The gltX gene encoding the glutamyl-tRNA synthetase of Escherichia coli and
adjacent regulatory regions was isolated and sequenced. The structural gene
encodes a protein of 471 amino acids whose molecular weight is 53,810. The
codon usage is that of genes highly expressed in E. coli. The amino acid
sequence deduced from the nucleotide sequence of the gltX gene was
confirmed by mass spectrometry of large peptides derived from the
glutamyl-tRNA synthetase. The observed peptides confirm 73% of the
predicted sequence, including the NH2-terminal and the COOH-terminal
segments. Sequence homology between the glutamyl-tRNA synthetase and other
aminoacyl-tRNA synthetases of E. coli was found in four segments. Three of
them are aligned in the same order in all the synthetases where they are
present, but the intersegment spacings are not constant; these ordered
segments may come from a progenitor to which other domains were added.
Starting from the NH2-end, the first two segments are part of a longer
region of homology with the glutaminyl-tRNA synthetase, without need for
gaps; its size, about 100 amino acids, is typical of a single folding
domain. In the first segment, containing sequences homologous to the HIGH
consensus, the homology is consistent with the following evolutionary
linkage: gltX---- glnS----metS----ileS and tyrS.